With modern, industrially produced transformers, paralleling is a non-issue: the number of turns is exact, especially for low-turns, low-voltage windings and even if the windings see different fluxes due to slight geometric asymmetries, it is of no consequence: the difference means that a significant leakage inductance exists between the windings, and this inductance acts as a ballast to equalize currents.
To summarize: if the windings are bifilar, paralleling is OK because a different number of turns is impossible, and if they are wound separately (and have the same number of turns), paralleling is OK too because they will naturally balance.
To be sure, just measure the voltage between the terminals you are about to connect after you have joined the first pair: if you read <100mV for a low voltage winding, it is OK.
If you still have doubts, make the final connection through an AC ammeter: if the current is smaller than 5% of the rated secondary current, then everything is fine.
The current balance under load will be much better, and will be perfectly sufficient.
All of the above applies for a single transformer with two windings: paralleling two separate transformers requires more attention (but remains possible)